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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Bubba Gilvin | 17th | Jeff McGinnis | 14th | 20th |
| First Basemen | Ricky Ortiz | 23rd | Jose Castro | 2nd | 19th |
| Second Basemen | Jose Salvatierra | 10th | Alex Mendoza | 4th | 8th |
| Third Basemen | Cirillo Argueta | 15th | Mike Hebert | 30th | 17th |
| Shortstops | Alex Reyna | 25th | Billy Bostick | 24th | 26th |
| Left Fielders | Eric Joy | 12th | Alex Munoz | 30th | 14th |
| Center Fielders | Josh Pearce | 1st | Bobby Marshall | 10th | 1st |
| Right Fielders | Cesar Fantini | Tied for 3rd | Tetsuya Fukushima | 2nd | 1st |
| Starting Pitchers | Javon Dill | 17th | Bob Scarborough | 17th | 19th |
| Relievers | Andy Parra | 24th | T.J. Schrammel | 32nd | 32nd |
| Closers | Josh Romero | 2nd | Alex Diaz | 12th | 1st |
