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| Saturday, July 28th , 2029 |
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| Promoted international complex member CF Juan Alvarado to Rookie League New York A (DSL). |
| Promoted international complex member C Luis Nieves to Rookie League New York A (DSL). |
| Thursday, July 19th , 2029 |
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| Drafted SS Chris Blachowski in the 2029 first-year player draft (Round 1, Pick 25, 25th overall pick). |
| Drafted LF Joe Escher in the 2029 first-year player draft (Round 2, Pick 25, 59th overall pick). |
| Drafted CF DeMario Mendoza in the 2029 first-year player draft (Round 3, Pick 22, 90th overall pick). |
| Drafted SP Andrew Abbott in the 2029 first-year player draft (Round 4, Pick 25, 123rd overall pick). |
| Drafted SP Shaun Clark in the 2029 first-year player draft (Round 5, Pick 25, 155th overall pick). |
| Drafted SS Pete Donaghey in the 2029 first-year player draft (Round 6, Pick 25, 187th overall pick). |
| Drafted CF Jeremy Alexander in the 2029 first-year player draft (Round 7, Pick 25, 219th overall pick). |
| Drafted C Mike Ashley in the 2029 first-year player draft (Round 8, Pick 25, 251st overall pick). |
| Drafted SP Jared Brignoni in the 2029 first-year player draft (Round 9, Pick 25, 283rd overall pick). |
| Drafted C Chris Broussard in the 2029 first-year player draft (Round 10, Pick 25, 315th overall pick). |
| Drafted 3B Josh Lempel in the 2029 first-year player draft (Round 11, Pick 25, 347th overall pick). |
| Drafted SP Mike Lail in the 2029 first-year player draft (Round 12, Pick 25, 379th overall pick). |
| Drafted RF Marc Sanders in the 2029 first-year player draft (Round 13, Pick 25, 411st overall pick). |
| Drafted 2B Shamar Polite in the 2029 first-year player draft (Round 14, Pick 25, 443rd overall pick). |
| Drafted C Juan Gomora in the 2029 first-year player draft (Round 15, Pick 25, 475th overall pick). |
| Drafted 3B Luis Mancilla in the 2029 first-year player draft (Round 16, Pick 25, 507th overall pick). |
| Drafted 1B Ron Dougherty in the 2029 first-year player draft (Round 17, Pick 25, 539th overall pick). |
| Drafted SS Kaj Wifstrand in the 2029 first-year player draft (Round 18, Pick 25, 571st overall pick). |
| Drafted SP Gene Strouse in the 2029 first-year player draft (Round 19, Pick 25, 603rd overall pick). |
| Drafted SP Josh Young in the 2029 first-year player draft (Round 20, Pick 25, 635th overall pick). |
| Drafted LF Eric Luna in the 2029 first-year player draft (Round 21, Pick 25, 667th overall pick). |
| Drafted SP Juan Guerrero in the 2029 first-year player draft (Round 22, Pick 25, 699th overall pick). |
| Drafted SP Sam Jensen in the 2029 first-year player draft (Round 23, Pick 25, 731st overall pick). |
| Drafted SP Josh Warchol in the 2029 first-year player draft (Round 24, Pick 25, 763rd overall pick). |
| Drafted RP Eddie Rice in the 2029 first-year player draft (Round 25, Pick 25, 795th overall pick). |
| Thursday, June 28th , 2029 |
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| Sent SP Steve Figueroa from Class A Charleston to High-A Tampa. |
| Sent 2B Oswald Peraza from Class A Charleston to High-A Tampa. |
| Monday, May 28th , 2029 |
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| Promoted international complex member 3B Luis Aldana to Rookie League New York A (DSL). |
| Friday, May 25th , 2029 |
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| Placed SP Travis Sthele on the secondary (40-man) roster. |
| Released SP Travis Sthele. |
| Tuesday, May 15th , 2029 |
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| Designated SP Travis Sthele for assignment. |
| Monday, May 14th , 2029 |
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| Released SP Luis Valenzuela. |
| Sunday, April 29th , 2029 |
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| RP Bryce Montes De Oca did not elect for free agency and will remain in the New York organization. |
| Monday, April 16th , 2029 |
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| Sent SP Travis Sthele to Triple A Scranton WB for injury rehab. |
| Promoted RP John Acosta from Rookie League New York A (DSL) to Double A Trenton. |
| Promoted SP Mike Santanello from Rookie League New York A (DSL) to High-A Tampa. |
| Placed SP Steve Figueroa on the South Atlantic League 7-day injured list, retroactive to 04/15/2029. |
| Sent SP Travis Sthele to Triple A Scranton WB for injury rehab. |
| Wednesday, April 11th , 2029 |
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| Signed free agent RP John Acosta to a minor league contract. |
| Signed free agent SP Mike Santanello to a minor league contract. |
| Friday, April 6th , 2029 |
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| Promoted SP Juan Medina from Rookie League New York A (DSL) to Double A Trenton. |
| Placed SP Mike Lyons on the Eastern League 7-day injured list, retroactive to 04/05/2029. |
| Wednesday, April 4th , 2029 |
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| Signed free agent SP Juan Medina to a minor league contract. |
| Friday, March 30th , 2029 |
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| Promoted international complex member SP Rodolfo Arteaga to Rookie League New York A (DSL). |
| Friday, March 23rd , 2029 |
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| Optioned 2B Jorge Bonachea to Triple A Scranton WB. |
| Optioned 1B Juan Montalvo to Triple A Scranton WB. |
| Optioned CF Harry Wood to Triple A Scranton WB. |
| Optioned LF Vince Allison to Triple A Scranton WB. |
| Placed SP Travis Sthele on the 15-day injured list, retroactive to 03/20/2029. |
| Optioned 2B Jorge Bonachea to Triple A Scranton WB. |
| Optioned 1B Juan Montalvo to Triple A Scranton WB. |
| Optioned CF Harry Wood to Triple A Scranton WB. |
| Optioned LF Vince Allison to Triple A Scranton WB. |
| Placed SP Travis Sthele on the 15-day injured list, retroactive to 03/20/2029. |
| Saturday, March 3rd , 2029 |
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| Signed international amateur SP Rayan Teyssier out of France to a minor league contract. |
| Friday, March 2nd , 2029 |
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| Traded 21-year old minor league CF Julio Y. Rodriguez to the Chicago White Sox, getting 26-year old LHP Joe Boyce and $6,000,000 in cash in return. |
| Placed SP Joe Boyce on the active roster. |
| Placed SP Joe Boyce on the secondary (40-man) roster. |
| Placed SP Joe Boyce on the active roster. |
| Promoted CL Whitney Boutillier from Rookie League New York (WL) to Double A Trenton. |
| Friday, February 23rd , 2029 |
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| Promoted international complex member SP Luis Tamez to Rookie League New York A (DSL). |
| Purchased the contract of CF Ron Lara from Double A Trenton. |
| Purchased the contract of CF Ben Schalck from Triple A Scranton WB. |
| Purchased the contract of SP Luis Rivera from Triple A Scranton WB. |
| Purchased the contract of LF Vince Allison from Double A Trenton. |
| Purchased the contract of RP Jared Jones from Triple A Scranton WB. |
| Purchased the contract of SP Albert Hernandez from Triple A Scranton WB. |
| Purchased the contract of RP Luis De La Rosa from Triple A Scranton WB. |
| Purchased the contract of CL Korey Heninger from Triple A Scranton WB. |
| Purchased the contract of 2B Jorge Bonachea from Double A Trenton. |
| Purchased the contract of SP Travis Sthele from Triple A Scranton WB. |
| Purchased the contract of 1B Juan Montalvo from Triple A Scranton WB. |
| Purchased the contract of 1B Hank Porter from Triple A Scranton WB. |
| Purchased the contract of CF Harry Wood from Triple A Scranton WB. |
| Sent 3B Eric Dirr from Rookie League New York (WL) to Rookie League New York A (USL). |
| Sent 2B Juan Cosme from Rookie League New York (WL) to Rookie League New York A (USL). |
| Promoted 1B Kevin Adams from Rookie League New York (WL) to Class A Charleston. |
| Promoted RF Randy Ojeda from Rookie League New York (WL) to Class A Charleston. |
| Promoted C Eric Bush from Rookie League New York (WL) to Class A Charleston. |
| Promoted 3B Chris Bailey from Rookie League New York (WL) to Class A Charleston. |
| Promoted SS Justin Langley from Rookie League New York (WL) to Class A Charleston. |
| Promoted 2B Oswald Peraza from Rookie League New York (WL) to Class A Charleston. |
| Promoted LF Zachary Leavitt from Rookie League New York (WL) to Class A Charleston. |
| Sent CF Chris Elko from Class A Charleston to High-A Tampa. |
| Demoted CL Tim Strader from Class A Charleston to Rookie League New York A (USL). |
| Promoted C Shawon Philon from High-A Tampa to Double A Trenton. |
| Released SP Braedon Ledlow. |
| Saturday, February 10th , 2029 |
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| Promoted RF Ben Treas from Rookie League New York (WL) to Triple A Scranton WB. |
| Promoted 1B Juan Montalvo from Rookie League New York (WL) to Triple A Scranton WB. |
| Promoted CF Julio Y. Rodriguez from Rookie League New York (WL) to Triple A Scranton WB. |
| Promoted CF Ben Schalck from Rookie League New York (WL) to Triple A Scranton WB. |
| Promoted RF Lars Nootbaar from Rookie League New York (WL) to Triple A Scranton WB. |
| Promoted SP Parker Mushinski from Rookie League New York (WL) to Triple A Scranton WB. |
| Promoted SP Nathan Markin from Rookie League New York (WL) to Triple A Scranton WB. |
| Promoted SP Luis Rivera from Rookie League New York (WL) to Triple A Scranton WB. |
| Promoted SP Josh Ardison from Rookie League New York (WL) to High-A Tampa. |
| Promoted SP Mike Lyons from Rookie League New York (WL) to Double A Trenton. |
| Promoted SP Justin Steele from Rookie League New York (WL) to Class A Charleston. |
| Promoted RP Gus Carey from Rookie League New York (WL) to Double A Trenton. |
| Promoted SS Mike Lombardi from Rookie League New York (WL) to High-A Tampa. |
| Promoted C Shawon Philon from Rookie League New York (WL) to High-A Tampa. |
| Promoted LF Vince Allison from Rookie League New York (WL) to Double A Trenton. |
| Promoted SP Sonny Powell from Rookie League New York (WL) to High-A Tampa. |
| Promoted SP Jake Krump from Rookie League New York (WL) to High-A Tampa. |
| Promoted CL Tim Strader from Rookie League New York (WL) to Class A Charleston. |
| Promoted SP Nate Hilton from Rookie League New York (WL) to Class A Charleston. |
| Promoted SP Maximo Castillo from Rookie League New York (WL) to Class A Charleston. |
| Promoted SP Mike Edwards from Rookie League New York (WL) to Class A Charleston. |
| Released SP Eric Turner. |
| Promoted CL Jonathan Fitzsimons from Rookie League New York A (USL) to Class A Charleston. |
| Promoted RP Mike Gabrielson from Rookie League New York A (USL) to Class A Charleston. |
| Promoted C Rodolfo Medrano from Rookie League New York A (USL) to Class A Charleston. |
| Saturday, February 3rd , 2029 |
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| Placed SP Dakota Hudson on the 60-day injured list. |
| Placed SP Dakota Hudson on the 60-day injured list. |
| Promoted SP Jordan Hedges from Rookie League New York (WL) to Class A Charleston. |
| Sent RP Brad Humphreys from Rookie League New York (WL) to Rookie League New York A (DSL). |
| Sent C Josh Adams from Rookie League New York (WL) to Rookie League New York A (USL). |
| Promoted LF Kevon McField from Rookie League New York (WL) to Class A Charleston. |
| Promoted 2B Gregorio Sorto from Rookie League New York (WL) to Triple A Scranton WB. |
| Promoted LF Esteban Ortega from High-A Tampa to Double A Trenton. |
| Sunday, January 28th , 2029 |
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| Promoted SP Colton Bowman from Rookie League New York A (DSL) to Triple A Scranton WB. |
| Promoted RP Gus Carey from Rookie League New York A (DSL) to High-A Tampa. |
| Promoted SP Richard Stahl from Rookie League New York A (DSL) to Double A Trenton. |
| Promoted CL Ignacio Alvarado from Rookie League New York A (DSL) to High-A Tampa. |
| Placed CL Whitney Boutillier on the eMLB Winter League 7-day injured list, retroactive to 01/27/2029. |
| Demoted RP Gus Carey from High-A Tampa to Rookie League New York (WL). |
| Thursday, January 25th , 2029 |
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| Signed free agent CL Ignacio Alvarado to a minor league contract. |
| Signed free agent RP Gus Carey to a minor league contract. |
| Signed free agent SP Richard Stahl to a minor league contract. |
| Signed free agent SP Colton Bowman to a minor league contract. |
| Tuesday, January 23rd , 2029 |
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| Signed international amateur C Sergio Aguilera out of Dominican Republic to a minor league contract with a $3,000,000 signing bonus. |
| Saturday, January 13th , 2029 |
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| Traded 22-year old minor league RHP Eric Bradley to the Pittsburgh Pirates, getting 21-year old minor league LHP Jake Krump in return. |
| Assigned RP Juan Garza to Triple A Scranton WB. |
| Assigned RP Ethan Wood to Triple A Scranton WB. |
| Assigned RP Juan Garza to Triple A Scranton WB. |
| Assigned RP Ethan Wood to Triple A Scranton WB. |
| Sent SP Jake Krump from Rookie League New York A (DSL) to Rookie League New York (WL). |
